Coming Soon!

March 10, 2017

Users will be able to visualize CHO cell mRNA expression data either from published DNA-microarray or RNA-Seq experiments via JBrowse. The visualized data will enable users to easily obtain gene expression levels and compare gene expression levels among different conditions.

CHOmine (BETA-Version)

August 19, 2016

CHOmine, the InterMine site for CHO and Chinese hamster, went online on August 11, 2016 at CHOmine collects and integrates publicly available Chinese hamster and CHO data, where different datasets are connected to provide user-friendly access. Currently, users are asked to test the site and to provide feedback (impressions, comments, issues, and suggestions for improvements) to or

CHO Epigenomic Data

April 14, 2016

A new database of epigenomic information ( for 6 CHO cell lines has been created by Dr. Nicole Borth's group. A link to this database has been added to's Data webpage. The epigenomic database website hosts genome sequences for 6 cell lines, SNPs, structural variants, full genome methylation data, and batch culture histone modification data. The manuscript describing the acquisition and analysis of the data can be found here.

see all

Genome Viewer (JBrowse)

Select from the annotated RefSeq CHO-K1 and CH genomes to view.

CHO-K1 (RefSeq Assembly GCF_000223151.1 | 2May2014 - Release 101)
Chinese Hamster (RefSeq Assembly GCF_000419365.1 | 2May2014 - Release 101)
CHO-K1 (RefSeq Assembly GCF_000223151.1 | 15Mar2012 - Release 1)