News

Gene Names with Prime Notation

June 24, 2015

Within the 2014 RefSeq annotations, 211 genes were recently identified as having not been loaded in the CHOgenome.org databases due to coding algorithm errors caused by prime notation (e.g. - 3' or 5') in the gene's name and product description. These errors have been rectified and the 211 genes, 115 genes in the 2014 CHO-K1 annotation and 96 genes in the 2014 CH annotation, have been correctly loaded to their respective CHOgenome.org databases. The complete list of these genes can be found on the Data tab in the CHO Community Files & Links section.

Update:

May 29, 2015

A featured article section has been added to the homepage, where articles of potential interest to the CHO community will be posted periodically. The current and past featured articles will be archived in the new "Featured Articles" page which can be accessed through the Resources tab.

Genome Viewer Upgrades

April 20, 2015

The 2012 tracks have been added to the CHO-K1 JBrowse genome viewer tool. In addition, the 2014 Chinese hamster RefSeq browser has been created with annotation tracks. A new portal page provides access to these browsers by selecting the Genome Viewer tab or button. Also, new links are available in the RefSeq gene details page that link directly to the appropriate JBrowse viewer and scaffold.

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Search RefSeq

Search the RefSeq CHO-K1 and Chinese hamster assemblies by gene name, symbol, or gene ID:

For detailed searches use Advanced Search

Welcome to the CHO Genome website! Tutorials for how to use this website can be viewed here and we welcome any questions or suggestions you may have.

Updates and details regarding the CHOStart project can be found here:

CHOStart

 

Genes Blast Genome Viewer

Gene Search
Search the RefSeq Chinese Hamster and CHO-K1 assemblies

BLAST
BLAST sequences against Chinese Hamster or CHO-K1 genomes

Genome Viewer
View the annotated RefSeq Chinese Hamster or CHO-K1 genomes

Proteome Downloads Genome Viewer

Proteome Browser
Search the 2-D gel and shotgun datasets

Downloads
Useful Chinese Hamster publications and files

CH Genome Viewer
View the chromosome-sorted Chinese Hamster genome

Events

Upcoming Events

Cell Culture Engineering XV

La Quinta, California, USA

May 8 - May 13, 2016

The Cell Culture Engineering XV conference will bring together about 350 selected participants from top academic, industrial and governmental groups from all over the world.

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Previous Events

249th ACS National Meeting & Exposition

Denver, CO, USA

March 22 - March 26, 2015

The 249th ACS National Meeting & Exposition in Denver, CO from March 22 - 26, 2015 will explore the overarching multidisciplinary theme of Chemistry of Natural Resources.

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4th International Conference on Accelerating Biopharmaceutical Development

Scottsdale, AZ, USA

March 1 - March 4, 2015

Accelerating Biopharmaceutical Development is dedicated to the advancement of process and product development technologies and capabilities for the acceleration and enablement of biopharmaceutical development.

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